Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 SPDYE19P-201ENST00000338590 713 ntBASIC20.22■□□□□ 0.83
SNED1Q8TER0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 RN7SL618P-201ENST00000477850 296 ntBASIC20.22■□□□□ 0.83
SNED1Q8TER0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 MIR6799-201ENST00000620297 69 ntBASIC20.22■□□□□ 0.83
SNED1Q8TER0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SNED1Q8TER0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNED1Q8TER0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 AC022210.1-201ENST00000449856 793 ntBASIC20.21■□□□□ 0.83
SNED1Q8TER0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 DOC2GP-202ENST00000514950 1163 ntBASIC20.21■□□□□ 0.83
SNED1Q8TER0 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 AC013467.2-201ENST00000605472 835 ntBASIC20.21■□□□□ 0.83
SNED1Q8TER0 AC099568.2-201ENST00000609194 695 ntBASIC20.21■□□□□ 0.83
SNED1Q8TER0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 MIR6805-201ENST00000615055 62 ntBASIC20.21■□□□□ 0.83
SNED1Q8TER0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 AL671710.1-201ENST00000610245 2349 ntBASIC20.21■□□□□ 0.83
SNED1Q8TER0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNED1Q8TER0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.21■□□□□ 0.83
SNED1Q8TER0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 AC055876.2-201ENST00000531834 546 ntBASIC20.2■□□□□ 0.82
SNED1Q8TER0 MIR4259-201ENST00000584466 101 ntBASIC20.2■□□□□ 0.82
SNED1Q8TER0 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.2■□□□□ 0.82
SNED1Q8TER0 AL033527.4-201ENST00000641026 673 ntBASIC20.2■□□□□ 0.82
SNED1Q8TER0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 AL133373.2-201ENST00000623187 2828 ntBASIC20.2■□□□□ 0.82
SNED1Q8TER0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
SNED1Q8TER0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNED1Q8TER0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms