Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AC007663.1-201ENST00000438948 1240 ntBASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 KRT18P65-201ENST00000439811 1286 ntBASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AC024243.1-201ENST00000609234 778 ntBASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 FAM197Y4-202ENST00000622692 608 ntBASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD2Q8IV50 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 FRMD8P1-201ENST00000440433 1524 ntBASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD2Q8IV50 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms