Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC087499.6-201ENST00000411576 835 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC234783.1-201ENST00000441761 496 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC092337.1-201ENST00000568699 1129 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 SNX1-214ENST00000625244 324 ntTSL 5 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 KRT18P55-202ENST00000578578 1546 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 MIR1908-201ENST00000410394 80 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 DOC2GP-202ENST00000514950 1163 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AL391069.4-201ENST00000609583 481 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AL139327.4-201ENST00000612362 153 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.54□□□□□ -0.56
CSMD3Q7Z407 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 ACTBP11-201ENST00000436287 1126 ntBASIC11.54□□□□□ -0.56
CSMD3Q7Z407 MTND6P24-201ENST00000440466 518 ntBASIC11.54□□□□□ -0.56
CSMD3Q7Z407 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 MIR8072-201ENST00000614241 80 ntBASIC11.54□□□□□ -0.56
CSMD3Q7Z407 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 PP12613-201ENST00000424958 2230 ntBASIC11.54□□□□□ -0.56
CSMD3Q7Z407 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CSMD3Q7Z407 NOC2LP1-202ENST00000452600 2235 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 AC079328.2-201ENST00000561241 3354 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms