Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AC097374.2-201ENST00000618617 1306 ntBASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AC009949.1-201ENST00000623048 1830 ntBASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AC096633.1-201ENST00000422446 749 ntBASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AC104819.1-201ENST00000504587 486 ntBASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AP000867.3-201ENST00000524675 377 ntBASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 AC092119.3-201ENST00000612618 583 ntBASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM53Q6P2H8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 AC009533.2-201ENST00000543664 586 ntBASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 NPAP1P7-201ENST00000613027 823 ntBASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM53Q6P2H8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM53Q6P2H8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms