Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL54Q6P161 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL54Q6P161 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL54Q6P161 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL54Q6P161 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL54Q6P161 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.77□□□□□ -0.36
MRPL54Q6P161 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL54Q6P161 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.77□□□□□ -0.37
MRPL54Q6P161 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 AP002490.2-201ENST00000524791 560 ntBASIC12.77□□□□□ -0.37
MRPL54Q6P161 AP003097.1-201ENST00000530657 1135 ntBASIC12.77□□□□□ -0.37
MRPL54Q6P161 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 AL645728.1-201ENST00000366221 2101 ntBASIC12.77□□□□□ -0.37
MRPL54Q6P161 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 EGFEM1P-202ENST00000431685 1563 ntBASIC12.77□□□□□ -0.37
MRPL54Q6P161 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL54Q6P161 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL54Q6P161 PRAL-201ENST00000624952 3286 ntBASIC12.77□□□□□ -0.37
MRPL54Q6P161 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 AL596087.1-201ENST00000400979 1969 ntBASIC12.76□□□□□ -0.37
MRPL54Q6P161 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 AL603832.2-201ENST00000566195 2125 ntBASIC12.76□□□□□ -0.37
MRPL54Q6P161 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms