Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 AL139384.1-201ENST00000612143 3047 ntBASIC17.06■□□□□ 0.32
SDE2Q6IQ49 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
SDE2Q6IQ49 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 TUBB3P1-201ENST00000405796 1332 ntBASIC17.05■□□□□ 0.32
SDE2Q6IQ49 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 BCRP1-201ENST00000444246 691 ntBASIC17.05■□□□□ 0.32
SDE2Q6IQ49 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 AC069262.1-201ENST00000539058 672 ntBASIC17.05■□□□□ 0.32
SDE2Q6IQ49 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDE2Q6IQ49 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 RNU1-129P-201ENST00000384064 167 ntBASIC17.04■□□□□ 0.32
SDE2Q6IQ49 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 FAM58DP-201ENST00000428076 619 ntBASIC17.04■□□□□ 0.32
SDE2Q6IQ49 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 AC093214.1-201ENST00000511688 1107 ntBASIC17.04■□□□□ 0.32
SDE2Q6IQ49 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 MIR3909-201ENST00000579518 119 ntBASIC17.04■□□□□ 0.32
SDE2Q6IQ49 U1.21-201ENST00000580816 167 ntBASIC17.04■□□□□ 0.32
SDE2Q6IQ49 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 AC131009.4-201ENST00000624048 1740 ntBASIC17.04■□□□□ 0.32
SDE2Q6IQ49 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDE2Q6IQ49 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 AC099398.1-201ENST00000567919 2776 ntBASIC17.03■□□□□ 0.32
SDE2Q6IQ49 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.03■□□□□ 0.32
SDE2Q6IQ49 BASP1P1-201ENST00000430708 665 ntBASIC17.03■□□□□ 0.32
SDE2Q6IQ49 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.03■□□□□ 0.32
SDE2Q6IQ49 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms