Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 VN2R19P-201ENST00000442399 1052 ntBASIC17.69■□□□□ 0.42
RNF43Q68DV7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 AC064836.3-201ENST00000607928 673 ntBASIC17.69■□□□□ 0.42
RNF43Q68DV7 GGTLC5P-201ENST00000617623 998 ntBASIC17.69■□□□□ 0.42
RNF43Q68DV7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF43Q68DV7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF43Q68DV7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF43Q68DV7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF43Q68DV7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF43Q68DV7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF43Q68DV7 AL603756.1-201ENST00000606511 2163 ntBASIC17.69■□□□□ 0.42
RNF43Q68DV7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF43Q68DV7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 IGLL3P-201ENST00000412472 434 ntBASIC17.68■□□□□ 0.42
RNF43Q68DV7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 AC244107.1-201ENST00000442033 332 ntBASIC17.68■□□□□ 0.42
RNF43Q68DV7 AC010654.1-201ENST00000615722 808 ntBASIC17.68■□□□□ 0.42
RNF43Q68DV7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 AC004790.2-201ENST00000623588 572 ntBASIC17.68■□□□□ 0.42
RNF43Q68DV7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 PCDHA1-201ENST00000378133 2726 ntBASIC17.68■□□□□ 0.42
RNF43Q68DV7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF43Q68DV7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF43Q68DV7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 KRT18P2-201ENST00000447938 1258 ntBASIC17.67■□□□□ 0.42
RNF43Q68DV7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF43Q68DV7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF43Q68DV7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms