Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 AL645929.1-201ENST00000420084 975 ntBASIC16.3■□□□□ 0.2
RNF220Q5VTB9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.29■□□□□ 0.2
RNF220Q5VTB9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF220Q5VTB9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 AC097374.2-201ENST00000618617 1306 ntBASIC16.28■□□□□ 0.2
RNF220Q5VTB9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF220Q5VTB9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms