Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AC131009.4-201ENST00000624048 1740 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AL353732.1-201ENST00000569618 1459 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 PMS2P1-201ENST00000431037 1228 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AP002469.2-201ENST00000531724 424 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 KRT126P-201ENST00000549467 1181 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AL160237.2-201ENST00000556165 472 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 AC005412.3-201ENST00000580309 715 ntBASIC14.72□□□□□ -0.05
HIST1H3AP68431 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H3AP68431 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H3AP68431 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.71□□□□□ -0.05
HIST1H3AP68431 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 AC005593.1-201ENST00000624894 515 ntBASIC14.71□□□□□ -0.05
HIST1H3AP68431 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H3AP68431 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H3AP68431 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST1H3AP68431 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST1H3AP68431 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
HIST1H3AP68431 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.71□□□□□ -0.06
HIST1H3AP68431 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.71□□□□□ -0.06
HIST1H3AP68431 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST1H3AP68431 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST1H3AP68431 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms