Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMIM11AP58511 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM11AP58511 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.56■□□□□ 0.08
SMIM11AP58511 AC211429.1-201ENST00000415277 523 ntBASIC15.56■□□□□ 0.08
SMIM11AP58511 DUX4L26-201ENST00000489078 1255 ntBASIC15.56■□□□□ 0.08
SMIM11AP58511 AC091607.1-201ENST00000490318 1060 ntBASIC15.56■□□□□ 0.08
SMIM11AP58511 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 AP000867.4-201ENST00000641616 219 ntBASIC15.56■□□□□ 0.08
SMIM11AP58511 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.56■□□□□ 0.08
SMIM11AP58511 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM11AP58511 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SMIM11AP58511 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.56■□□□□ 0.08
SMIM11AP58511 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM11AP58511 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
SMIM11AP58511 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.56■□□□□ 0.08
SMIM11AP58511 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMIM11AP58511 AC067930.6-201ENST00000623257 4947 ntBASIC15.56■□□□□ 0.08
SMIM11AP58511 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 LINC02199-201ENST00000506655 2702 ntBASIC15.55■□□□□ 0.08
SMIM11AP58511 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 SIGLEC16-201ENST00000599858 1437 ntBASIC15.55■□□□□ 0.08
SMIM11AP58511 KRT18P1-202ENST00000452408 1331 ntBASIC15.55■□□□□ 0.08
SMIM11AP58511 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SMIM11AP58511 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
SMIM11AP58511 AL121956.5-201ENST00000625261 221 ntBASIC15.55■□□□□ 0.08
SMIM11AP58511 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMIM11AP58511 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMIM11AP58511 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
SMIM11AP58511 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM11AP58511 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM11AP58511 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.54■□□□□ 0.08
SMIM11AP58511 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.54■□□□□ 0.08
SMIM11AP58511 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM11AP58511 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 AC006277.1-201ENST00000624348 1610 ntBASIC15.54■□□□□ 0.08
SMIM11AP58511 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM11AP58511 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
SMIM11AP58511 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM11AP58511 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM11AP58511 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SMIM11AP58511 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SMIM11AP58511 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SMIM11AP58511 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM11AP58511 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM11AP58511 POM121L3P-201ENST00000419331 1163 ntBASIC15.54■□□□□ 0.08
SMIM11AP58511 LINC00982-205ENST00000420957 435 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms