Protein–RNA interactions for Protein: P57059

SIK1, Serine/threonine-protein kinase SIK1, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK1P57059 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.17■□□□□ 0.98
SIK1P57059 AC013467.2-201ENST00000605472 835 ntBASIC21.17■□□□□ 0.98
SIK1P57059 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIK1P57059 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.17■□□□□ 0.98
SIK1P57059 MIR6805-201ENST00000615055 62 ntBASIC21.17■□□□□ 0.98
SIK1P57059 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.17■□□□□ 0.98
SIK1P57059 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.17■□□□□ 0.98
SIK1P57059 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIK1P57059 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIK1P57059 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIK1P57059 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIK1P57059 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.17■□□□□ 0.98
SIK1P57059 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SIK1P57059 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
SIK1P57059 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 SNX33P1-201ENST00000592116 1762 ntBASIC21.16■□□□□ 0.98
SIK1P57059 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.16■□□□□ 0.98
SIK1P57059 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.16■□□□□ 0.98
SIK1P57059 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.16■□□□□ 0.98
SIK1P57059 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SIK1P57059 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SIK1P57059 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.16■□□□□ 0.98
SIK1P57059 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIK1P57059 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SIK1P57059 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 TUBB8P12-201ENST00000308911 1335 ntBASIC21.15■□□□□ 0.98
SIK1P57059 TUBB7P-202ENST00000428444 1305 ntBASIC21.15■□□□□ 0.98
SIK1P57059 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 TUBB8P7-204ENST00000567960 1332 ntBASIC21.15■□□□□ 0.98
SIK1P57059 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.15■□□□□ 0.98
SIK1P57059 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
SIK1P57059 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.15■□□□□ 0.98
SIK1P57059 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.15■□□□□ 0.98
SIK1P57059 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIK1P57059 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SIK1P57059 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.15■□□□□ 0.98
SIK1P57059 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIK1P57059 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIK1P57059 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SIK1P57059 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIK1P57059 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIK1P57059 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIK1P57059 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SIK1P57059 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIK1P57059 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms