Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
WNT3AP56704 AC006538.1-201ENST00000567905 1585 ntBASIC17.02■□□□□ 0.31
WNT3AP56704 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
WNT3AP56704 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
WNT3AP56704 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
WNT3AP56704 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.02■□□□□ 0.31
WNT3AP56704 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 VN2R19P-201ENST00000442399 1052 ntBASIC17.01■□□□□ 0.31
WNT3AP56704 FAM185BP-201ENST00000443595 716 ntBASIC17.01■□□□□ 0.31
WNT3AP56704 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.01■□□□□ 0.31
WNT3AP56704 ACTL9-202ENST00000612068 1252 ntBASIC17.01■□□□□ 0.31
WNT3AP56704 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
WNT3AP56704 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
WNT3AP56704 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
WNT3AP56704 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
WNT3AP56704 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17■□□□□ 0.31
WNT3AP56704 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17■□□□□ 0.31
WNT3AP56704 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 ATP6V0CP3-201ENST00000417255 467 ntBASIC17■□□□□ 0.31
WNT3AP56704 HLA-J-202ENST00000469281 1241 ntBASIC17■□□□□ 0.31
WNT3AP56704 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17■□□□□ 0.31
WNT3AP56704 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17■□□□□ 0.31
WNT3AP56704 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17■□□□□ 0.31
WNT3AP56704 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17■□□□□ 0.31
WNT3AP56704 AL118508.1-201ENST00000613502 2345 ntBASIC17■□□□□ 0.31
WNT3AP56704 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17■□□□□ 0.31
WNT3AP56704 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
WNT3AP56704 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17■□□□□ 0.31
WNT3AP56704 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
WNT3AP56704 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
WNT3AP56704 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 AL671710.1-201ENST00000610245 2349 ntBASIC16.99■□□□□ 0.31
WNT3AP56704 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.99■□□□□ 0.31
WNT3AP56704 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.99■□□□□ 0.31
WNT3AP56704 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.99■□□□□ 0.31
WNT3AP56704 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 CYP2A7P1-201ENST00000595391 815 ntBASIC16.99■□□□□ 0.31
WNT3AP56704 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 Z83851.2-201ENST00000609564 659 ntBASIC16.99■□□□□ 0.31
WNT3AP56704 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.99■□□□□ 0.31
WNT3AP56704 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.99■□□□□ 0.31
WNT3AP56704 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
WNT3AP56704 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.99■□□□□ 0.31
WNT3AP56704 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
WNT3AP56704 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
WNT3AP56704 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
WNT3AP56704 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.98■□□□□ 0.31
WNT3AP56704 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
WNT3AP56704 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.98■□□□□ 0.31
WNT3AP56704 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.98■□□□□ 0.31
WNT3AP56704 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
WNT3AP56704 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms