Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNQ4P56696 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
KCNQ4P56696 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ4P56696 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
KCNQ4P56696 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KCNQ4P56696 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.21■□□□□ 0.99
KCNQ4P56696 AC114501.2-201ENST00000439631 535 ntBASIC21.21■□□□□ 0.99
KCNQ4P56696 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.21■□□□□ 0.99
KCNQ4P56696 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.21■□□□□ 0.99
KCNQ4P56696 KRT223P-202ENST00000449164 1292 ntBASIC21.21■□□□□ 0.99
KCNQ4P56696 AC098859.1-201ENST00000502915 1238 ntBASIC21.21■□□□□ 0.99
KCNQ4P56696 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ4P56696 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNQ4P56696 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ4P56696 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ4P56696 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNQ4P56696 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNQ4P56696 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
KCNQ4P56696 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
KCNQ4P56696 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
KCNQ4P56696 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KCNQ4P56696 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNQ4P56696 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNQ4P56696 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
KCNQ4P56696 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.2■□□□□ 0.98
KCNQ4P56696 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNQ4P56696 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 TPRX2P-201ENST00000535362 881 ntBASIC21.2■□□□□ 0.98
KCNQ4P56696 AC123567.1-201ENST00000548294 1261 ntBASIC21.2■□□□□ 0.98
KCNQ4P56696 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KCNQ4P56696 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KCNQ4P56696 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.2■□□□□ 0.98
KCNQ4P56696 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.2■□□□□ 0.98
KCNQ4P56696 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ4P56696 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNQ4P56696 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNQ4P56696 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.19■□□□□ 0.98
KCNQ4P56696 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.19■□□□□ 0.98
KCNQ4P56696 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.19■□□□□ 0.98
KCNQ4P56696 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.19■□□□□ 0.98
KCNQ4P56696 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.19■□□□□ 0.98
KCNQ4P56696 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNQ4P56696 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNQ4P56696 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
KCNQ4P56696 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.19■□□□□ 0.98
KCNQ4P56696 AC099568.2-201ENST00000609194 695 ntBASIC21.19■□□□□ 0.98
KCNQ4P56696 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
KCNQ4P56696 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ4P56696 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
KCNQ4P56696 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
KCNQ4P56696 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.18■□□□□ 0.98
KCNQ4P56696 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.18■□□□□ 0.98
KCNQ4P56696 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.18■□□□□ 0.98
KCNQ4P56696 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 FAM8A2P-201ENST00000528813 1142 ntBASIC21.18■□□□□ 0.98
KCNQ4P56696 AC055876.2-201ENST00000531834 546 ntBASIC21.18■□□□□ 0.98
KCNQ4P56696 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.18■□□□□ 0.98
KCNQ4P56696 WFDC1-204ENST00000613603 549 ntBASIC21.18■□□□□ 0.98
KCNQ4P56696 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.18■□□□□ 0.98
KCNQ4P56696 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KCNQ4P56696 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ4P56696 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms