Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.93■□□□□ 0.46
CDH8P55286 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH8P55286 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH8P55286 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 BX842568.4-201ENST00000421222 227 ntBASIC17.93■□□□□ 0.46
CDH8P55286 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH8P55286 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH8P55286 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 AP002472.1-201ENST00000577490 586 ntBASIC17.93■□□□□ 0.46
CDH8P55286 AC006538.3-201ENST00000612495 578 ntBASIC17.93■□□□□ 0.46
CDH8P55286 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH8P55286 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH8P55286 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDH8P55286 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH8P55286 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CDH8P55286 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH8P55286 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 AC112482.1-201ENST00000492080 688 ntBASIC17.92■□□□□ 0.46
CDH8P55286 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH8P55286 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH8P55286 AC010327.4-202ENST00000591484 748 ntBASIC17.92■□□□□ 0.46
CDH8P55286 AC068137.2-201ENST00000605408 478 ntBASIC17.92■□□□□ 0.46
CDH8P55286 AP001350.2-201ENST00000625104 1094 ntBASIC17.92■□□□□ 0.46
CDH8P55286 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH8P55286 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH8P55286 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDH8P55286 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH8P55286 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH8P55286 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDH8P55286 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH8P55286 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 AC079328.2-201ENST00000561241 3354 ntBASIC17.91■□□□□ 0.46
CDH8P55286 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH8P55286 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH8P55286 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH8P55286 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH8P55286 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH8P55286 KRT18P13-201ENST00000400056 1290 ntBASIC17.91■□□□□ 0.46
CDH8P55286 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.91■□□□□ 0.46
CDH8P55286 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH8P55286 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms