Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 AC004706.3-202ENST00000621574 984 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6CP51160 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6CP51160 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 PCDHB17P-201ENST00000539533 2393 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.22■□□□□ 0.51
PDE6CP51160 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PDE6CP51160 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
PDE6CP51160 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDE6CP51160 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6CP51160 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PDE6CP51160 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDE6CP51160 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 AL021920.2-201ENST00000624828 1351 ntBASIC18.21■□□□□ 0.51
PDE6CP51160 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDE6CP51160 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE6CP51160 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 AC073621.1-201ENST00000392730 636 ntBASIC18.21■□□□□ 0.51
PDE6CP51160 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6CP51160 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE6CP51160 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 RNA5SP416-201ENST00000516838 111 ntBASIC18.21■□□□□ 0.51
PDE6CP51160 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6CP51160 AC140113.2-201ENST00000604370 208 ntBASIC18.21■□□□□ 0.51
PDE6CP51160 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6CP51160 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6CP51160 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
PDE6CP51160 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDE6CP51160 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6CP51160 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE6CP51160 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PDE6CP51160 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.21■□□□□ 0.5
PDE6CP51160 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDE6CP51160 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE6CP51160 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE6CP51160 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms