Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF144AP50876 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF144AP50876 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 AC073648.2-201ENST00000510116 352 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 KRT126P-201ENST00000549467 1181 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 AC012640.2-201ENST00000561606 901 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 AC139887.3-201ENST00000568585 713 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 AL049840.3-201ENST00000602669 611 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 AL121912.1-201ENST00000603683 238 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 AL139424.1-201ENST00000607572 797 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF144AP50876 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 AP002414.3-201ENST00000589352 1468 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF144AP50876 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 AC008894.3-201ENST00000624324 3103 ntBASIC15.7■□□□□ 0.1
RNF144AP50876 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF144AP50876 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF144AP50876 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RNF144AP50876 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RNF144AP50876 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF144AP50876 PTCHD3P3-201ENST00000403073 906 ntBASIC15.69■□□□□ 0.1
RNF144AP50876 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF144AP50876 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF144AP50876 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF144AP50876 PRYP5-201ENST00000451909 266 ntBASIC15.69■□□□□ 0.1
RNF144AP50876 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 OR7E14P-202ENST00000530490 1290 ntBASIC15.69■□□□□ 0.1
RNF144AP50876 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF144AP50876 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF144AP50876 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.69■□□□□ 0.1
RNF144AP50876 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF144AP50876 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RNF144AP50876 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF144AP50876 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms