Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.95■□□□□ 0.3
MDH1P40925 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.95■□□□□ 0.3
MDH1P40925 AC006058.3-201ENST00000606217 1069 ntBASIC16.95■□□□□ 0.3
MDH1P40925 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 CDC14C-201ENST00000428251 1719 ntBASIC16.95■□□□□ 0.3
MDH1P40925 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MDH1P40925 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 UBE2SP1-201ENST00000450587 669 ntBASIC16.94■□□□□ 0.3
MDH1P40925 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 LINC02447-202ENST00000501888 2146 ntBASIC16.94■□□□□ 0.3
MDH1P40925 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MDH1P40925 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
MDH1P40925 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MDH1P40925 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.93■□□□□ 0.3
MDH1P40925 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MDH1P40925 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 SNX18-202ENST00000343017 3140 ntBASIC16.93■□□□□ 0.3
MDH1P40925 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.93■□□□□ 0.3
MDH1P40925 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MDH1P40925 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.93■□□□□ 0.3
MDH1P40925 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.93■□□□□ 0.3
MDH1P40925 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 NEK4P2-201ENST00000580004 1012 ntBASIC16.93■□□□□ 0.3
MDH1P40925 STK25P1-201ENST00000585406 838 ntBASIC16.93■□□□□ 0.3
MDH1P40925 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.93■□□□□ 0.3
MDH1P40925 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MDH1P40925 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms