Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.08■□□□□ 0.17
KRT20P35900 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
KRT20P35900 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
KRT20P35900 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT20P35900 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KRT20P35900 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 SPDYE21P-201ENST00000413323 827 ntBASIC16.08■□□□□ 0.16
KRT20P35900 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
KRT20P35900 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 KRT126P-201ENST00000549467 1181 ntBASIC16.08■□□□□ 0.16
KRT20P35900 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.08■□□□□ 0.16
KRT20P35900 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.08■□□□□ 0.16
KRT20P35900 AL355877.3-201ENST00000622820 899 ntBASIC16.08■□□□□ 0.16
KRT20P35900 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT20P35900 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT20P35900 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KRT20P35900 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
KRT20P35900 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT20P35900 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT20P35900 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
KRT20P35900 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KRT20P35900 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.07■□□□□ 0.16
KRT20P35900 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT20P35900 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT20P35900 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT20P35900 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT20P35900 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT20P35900 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT20P35900 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.07■□□□□ 0.16
KRT20P35900 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 AC079776.2-201ENST00000641154 1609 ntBASIC16.07■□□□□ 0.16
KRT20P35900 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT20P35900 AC026691.1-201ENST00000602502 2017 ntBASIC16.07■□□□□ 0.16
KRT20P35900 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 PCDHB17P-201ENST00000539533 2393 ntBASIC16.07■□□□□ 0.16
KRT20P35900 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT20P35900 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT20P35900 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms