Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.44□□□□□ -0.42
CKS2P33552 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.44□□□□□ -0.42
CKS2P33552 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.44□□□□□ -0.42
CKS2P33552 REXO1L10P-201ENST00000615707 1290 ntBASIC12.44□□□□□ -0.42
CKS2P33552 REXO1L12P-201ENST00000622156 912 ntBASIC12.44□□□□□ -0.42
CKS2P33552 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 ME2P1-201ENST00000426028 1970 ntBASIC12.43□□□□□ -0.42
CKS2P33552 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 TUBB8P12-201ENST00000308911 1335 ntBASIC12.43□□□□□ -0.42
CKS2P33552 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CKS2P33552 TUBB7P-202ENST00000428444 1305 ntBASIC12.43□□□□□ -0.42
CKS2P33552 TUBB8P7-204ENST00000567960 1332 ntBASIC12.43□□□□□ -0.42
CKS2P33552 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.43□□□□□ -0.42
CKS2P33552 AL645728.1-201ENST00000366221 2101 ntBASIC12.43□□□□□ -0.42
CKS2P33552 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CKS2P33552 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.43□□□□□ -0.42
CKS2P33552 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.43□□□□□ -0.42
CKS2P33552 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
CKS2P33552 AC007663.1-201ENST00000438948 1240 ntBASIC12.43□□□□□ -0.42
CKS2P33552 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.43□□□□□ -0.42
CKS2P33552 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.43□□□□□ -0.42
CKS2P33552 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.43□□□□□ -0.42
CKS2P33552 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.43□□□□□ -0.42
CKS2P33552 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.43□□□□□ -0.42
CKS2P33552 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.43□□□□□ -0.42
CKS2P33552 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.43□□□□□ -0.42
CKS2P33552 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CKS2P33552 AL157888.1-201ENST00000631930 593 ntBASIC12.43□□□□□ -0.42
CKS2P33552 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CKS2P33552 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CKS2P33552 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CKS2P33552 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms