Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.42■□□□□ 0.38
CCR1P32246 AL139011.1-202ENST00000642063 584 ntBASIC17.42■□□□□ 0.38
CCR1P32246 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
CCR1P32246 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCR1P32246 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR1P32246 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCR1P32246 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCR1P32246 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCR1P32246 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCR1P32246 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCR1P32246 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 YBX2P1-201ENST00000394192 760 ntBASIC17.41■□□□□ 0.38
CCR1P32246 AC140658.5-201ENST00000438532 169 ntBASIC17.41■□□□□ 0.38
CCR1P32246 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.41■□□□□ 0.38
CCR1P32246 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.41■□□□□ 0.38
CCR1P32246 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.41■□□□□ 0.38
CCR1P32246 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.41■□□□□ 0.38
CCR1P32246 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
CCR1P32246 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.41■□□□□ 0.38
CCR1P32246 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR1P32246 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCR1P32246 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.4■□□□□ 0.38
CCR1P32246 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.4■□□□□ 0.38
CCR1P32246 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.4■□□□□ 0.38
CCR1P32246 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCR1P32246 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.4■□□□□ 0.38
CCR1P32246 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.4■□□□□ 0.38
CCR1P32246 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.4■□□□□ 0.38
CCR1P32246 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.4■□□□□ 0.38
CCR1P32246 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.4■□□□□ 0.38
CCR1P32246 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCR1P32246 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CCR1P32246 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.4■□□□□ 0.38
CCR1P32246 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.4■□□□□ 0.38
CCR1P32246 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 AD000864.1-201ENST00000624076 2295 ntBASIC17.4■□□□□ 0.38
CCR1P32246 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCR1P32246 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.39■□□□□ 0.38
CCR1P32246 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.39■□□□□ 0.37
CCR1P32246 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CCR1P32246 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.39■□□□□ 0.37
CCR1P32246 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.39■□□□□ 0.37
CCR1P32246 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 RNU1-129P-201ENST00000384064 167 ntBASIC17.39■□□□□ 0.37
CCR1P32246 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.39■□□□□ 0.37
CCR1P32246 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.39■□□□□ 0.37
CCR1P32246 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.39■□□□□ 0.37
CCR1P32246 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.39■□□□□ 0.37
CCR1P32246 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CCR1P32246 MIR3909-201ENST00000579518 119 ntBASIC17.39■□□□□ 0.37
CCR1P32246 U1.21-201ENST00000580816 167 ntBASIC17.39■□□□□ 0.37
CCR1P32246 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.39■□□□□ 0.37
CCR1P32246 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCR1P32246 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.39■□□□□ 0.37
CCR1P32246 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCR1P32246 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCR1P32246 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCR1P32246 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCR1P32246 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms