Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.83■□□□□ 0.6
CASP1P29466 PMS2P1-201ENST00000431037 1228 ntBASIC18.83■□□□□ 0.6
CASP1P29466 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.83■□□□□ 0.6
CASP1P29466 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.83■□□□□ 0.6
CASP1P29466 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 AP002490.2-201ENST00000524791 560 ntBASIC18.83■□□□□ 0.6
CASP1P29466 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.83■□□□□ 0.6
CASP1P29466 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CASP1P29466 RN7SL510P-201ENST00000581311 263 ntBASIC18.83■□□□□ 0.6
CASP1P29466 AL049840.3-201ENST00000602669 611 ntBASIC18.83■□□□□ 0.6
CASP1P29466 AL121912.1-201ENST00000603683 238 ntBASIC18.83■□□□□ 0.6
CASP1P29466 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.83■□□□□ 0.6
CASP1P29466 AL031008.1-201ENST00000619963 541 ntBASIC18.83■□□□□ 0.6
CASP1P29466 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CASP1P29466 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CASP1P29466 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.83■□□□□ 0.6
CASP1P29466 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CASP1P29466 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP1P29466 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.83■□□□□ 0.6
CASP1P29466 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CASP1P29466 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 AC006538.1-201ENST00000567905 1585 ntBASIC18.82■□□□□ 0.6
CASP1P29466 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP1P29466 AC073648.2-201ENST00000510116 352 ntBASIC18.82■□□□□ 0.6
CASP1P29466 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 AC107918.2-201ENST00000530817 355 ntBASIC18.82■□□□□ 0.6
CASP1P29466 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.82■□□□□ 0.6
CASP1P29466 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP1P29466 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.82■□□□□ 0.6
CASP1P29466 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP1P29466 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP1P29466 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.81■□□□□ 0.6
CASP1P29466 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CASP1P29466 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.81■□□□□ 0.6
CASP1P29466 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 AC006557.2-201ENST00000592985 1240 ntBASIC18.81■□□□□ 0.6
CASP1P29466 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 AC013467.2-201ENST00000605472 835 ntBASIC18.81■□□□□ 0.6
CASP1P29466 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CASP1P29466 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP1P29466 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.81■□□□□ 0.6
CASP1P29466 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP1P29466 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms