Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL8A2P25067 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.22□□□□□ -0.13
COL8A2P25067 AL671277.1-201ENST00000429656 993 ntBASIC14.22□□□□□ -0.13
COL8A2P25067 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.22□□□□□ -0.13
COL8A2P25067 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.22□□□□□ -0.13
COL8A2P25067 AC105339.1-204ENST00000636249 355 ntBASIC14.22□□□□□ -0.13
COL8A2P25067 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COL8A2P25067 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COL8A2P25067 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COL8A2P25067 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.21□□□□□ -0.13
COL8A2P25067 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
COL8A2P25067 LINC02012-201ENST00000608206 1725 ntBASIC14.21□□□□□ -0.13
COL8A2P25067 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.21□□□□□ -0.13
COL8A2P25067 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.21□□□□□ -0.13
COL8A2P25067 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 NKILA-202ENST00000614771 2598 ntBASIC14.21□□□□□ -0.13
COL8A2P25067 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.21□□□□□ -0.13
COL8A2P25067 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.21□□□□□ -0.13
COL8A2P25067 DUX4L17-201ENST00000557360 1267 ntBASIC14.21□□□□□ -0.13
COL8A2P25067 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.21□□□□□ -0.13
COL8A2P25067 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.21□□□□□ -0.13
COL8A2P25067 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.21□□□□□ -0.13
COL8A2P25067 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
COL8A2P25067 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
COL8A2P25067 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL8A2P25067 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL8A2P25067 AC092053.1-201ENST00000605787 1936 ntBASIC14.21□□□□□ -0.14
COL8A2P25067 AD000864.1-201ENST00000624076 2295 ntBASIC14.21□□□□□ -0.14
COL8A2P25067 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL8A2P25067 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.21□□□□□ -0.14
COL8A2P25067 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.21□□□□□ -0.14
COL8A2P25067 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COL8A2P25067 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL8A2P25067 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
COL8A2P25067 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
COL8A2P25067 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.2□□□□□ -0.14
COL8A2P25067 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
COL8A2P25067 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 SLC22A20-204ENST00000530038 1673 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.2□□□□□ -0.14
COL8A2P25067 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.2□□□□□ -0.14
COL8A2P25067 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COL8A2P25067 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.2□□□□□ -0.14
COL8A2P25067 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COL8A2P25067 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms