Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 IGHV3-22-201ENST00000520721 359 ntBASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DPA1P20036 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DPA1P20036 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DPA1P20036 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DPA1P20036 HLA-J-202ENST00000469281 1241 ntBASIC17■□□□□ 0.31
HLA-DPA1P20036 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HLA-DPA1P20036 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 UNC93B6-202ENST00000528242 690 ntBASIC17■□□□□ 0.31
HLA-DPA1P20036 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 OR7E47P-204ENST00000575924 449 ntBASIC17■□□□□ 0.31
HLA-DPA1P20036 MIR4751-201ENST00000578027 74 ntBASIC17■□□□□ 0.31
HLA-DPA1P20036 MIR4492-201ENST00000581627 80 ntBASIC17■□□□□ 0.31
HLA-DPA1P20036 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPA1P20036 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPA1P20036 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AL603756.1-201ENST00000606511 2163 ntBASIC16.99■□□□□ 0.31
HLA-DPA1P20036 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AC131009.4-201ENST00000624048 1740 ntBASIC16.99■□□□□ 0.31
HLA-DPA1P20036 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AC009947.1-201ENST00000444350 727 ntBASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AC079776.4-201ENST00000511039 504 ntBASIC16.99■□□□□ 0.31
HLA-DPA1P20036 RNA5SP415-201ENST00000517246 115 ntBASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms