Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM21P19474 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM21P19474 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRIM21P19474 EMBP1-201ENST00000458200 901 ntBASIC18.63■□□□□ 0.57
TRIM21P19474 UNC93B7-201ENST00000509439 705 ntBASIC18.63■□□□□ 0.57
TRIM21P19474 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM21P19474 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM21P19474 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM21P19474 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM21P19474 SIGLEC16-201ENST00000599858 1437 ntBASIC18.63■□□□□ 0.57
TRIM21P19474 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM21P19474 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 AC079776.2-201ENST00000641154 1609 ntBASIC18.63■□□□□ 0.57
TRIM21P19474 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 AC006449.5-201ENST00000610658 2098 ntBASIC18.62■□□□□ 0.57
TRIM21P19474 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRIM21P19474 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRIM21P19474 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 SPDYE21P-201ENST00000413323 827 ntBASIC18.62■□□□□ 0.57
TRIM21P19474 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 AF186996.4-201ENST00000467186 377 ntBASIC18.62■□□□□ 0.57
TRIM21P19474 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM21P19474 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM21P19474 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM21P19474 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM21P19474 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM21P19474 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM21P19474 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM21P19474 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM21P19474 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM21P19474 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM21P19474 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
TRIM21P19474 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM21P19474 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM21P19474 TUBB8P12-201ENST00000308911 1335 ntBASIC18.61■□□□□ 0.57
TRIM21P19474 TUBB7P-202ENST00000428444 1305 ntBASIC18.61■□□□□ 0.57
TRIM21P19474 TUBB8P7-204ENST00000567960 1332 ntBASIC18.61■□□□□ 0.57
TRIM21P19474 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 RPS2P28-201ENST00000314255 741 ntBASIC18.61■□□□□ 0.57
TRIM21P19474 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM21P19474 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM21P19474 AP002490.2-201ENST00000524791 560 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms