Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 TERF1P1-201ENST00000311003 1181 ntBASIC15.97■□□□□ 0.15
NCK1P16333 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NCK1P16333 AL596275.1-201ENST00000423464 877 ntBASIC15.97■□□□□ 0.15
NCK1P16333 TSPY5P-201ENST00000426936 936 ntBASIC15.97■□□□□ 0.15
NCK1P16333 AL137013.1-201ENST00000432946 1228 ntBASIC15.97■□□□□ 0.15
NCK1P16333 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.97■□□□□ 0.15
NCK1P16333 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.97■□□□□ 0.15
NCK1P16333 AL353801.3-201ENST00000609898 542 ntBASIC15.97■□□□□ 0.15
NCK1P16333 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.97■□□□□ 0.15
NCK1P16333 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NCK1P16333 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.97■□□□□ 0.15
NCK1P16333 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.97■□□□□ 0.15
NCK1P16333 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NCK1P16333 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
NCK1P16333 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.96■□□□□ 0.15
NCK1P16333 AC006538.1-201ENST00000567905 1585 ntBASIC15.96■□□□□ 0.15
NCK1P16333 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.96■□□□□ 0.15
NCK1P16333 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.96■□□□□ 0.15
NCK1P16333 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.96■□□□□ 0.15
NCK1P16333 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCK1P16333 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NCK1P16333 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.96■□□□□ 0.14
NCK1P16333 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.96■□□□□ 0.14
NCK1P16333 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.96■□□□□ 0.14
NCK1P16333 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NCK1P16333 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.95■□□□□ 0.14
NCK1P16333 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 AC010491.1-201ENST00000563101 2797 ntBASIC15.95■□□□□ 0.14
NCK1P16333 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.95■□□□□ 0.14
NCK1P16333 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.95■□□□□ 0.14
NCK1P16333 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 AC113347.1-201ENST00000413321 391 ntBASIC15.95■□□□□ 0.14
NCK1P16333 TSPY22P-201ENST00000427496 604 ntBASIC15.95■□□□□ 0.14
NCK1P16333 HOMER2P1-201ENST00000455653 964 ntBASIC15.95■□□□□ 0.14
NCK1P16333 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.95■□□□□ 0.14
NCK1P16333 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.95■□□□□ 0.14
NCK1P16333 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.95■□□□□ 0.14
NCK1P16333 AC011840.4-201ENST00000578471 627 ntBASIC15.95■□□□□ 0.14
NCK1P16333 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.95■□□□□ 0.14
NCK1P16333 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms