Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH1P12830 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH1P12830 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.46■□□□□ 0.23
CDH1P12830 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH1P12830 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 AP002414.1-201ENST00000391405 1147 ntBASIC16.46■□□□□ 0.23
CDH1P12830 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH1P12830 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH1P12830 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH1P12830 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH1P12830 AL356488.2-201ENST00000602755 427 ntBASIC16.46■□□□□ 0.23
CDH1P12830 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDH1P12830 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH1P12830 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
CDH1P12830 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH1P12830 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CDH1P12830 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.46■□□□□ 0.22
CDH1P12830 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CDH1P12830 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH1P12830 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH1P12830 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH1P12830 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH1P12830 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH1P12830 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH1P12830 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 PI4KAP1-204ENST00000612579 1703 ntBASIC16.45■□□□□ 0.22
CDH1P12830 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH1P12830 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH1P12830 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH1P12830 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH1P12830 AC092910.1-201ENST00000482027 1129 ntBASIC16.45■□□□□ 0.22
CDH1P12830 RPS15P9-201ENST00000494093 319 ntBASIC16.45■□□□□ 0.22
CDH1P12830 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH1P12830 AL662844.1-201ENST00000546340 181 ntBASIC16.45■□□□□ 0.22
CDH1P12830 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH1P12830 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH1P12830 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH1P12830 TERC-201ENST00000602385 541 ntBASIC16.45■□□□□ 0.22
CDH1P12830 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDH1P12830 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH1P12830 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH1P12830 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH1P12830 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH1P12830 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH1P12830 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 RNA5SP419-201ENST00000515908 135 ntBASIC16.44■□□□□ 0.22
CDH1P12830 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 AP001005.1-201ENST00000571755 1248 ntBASIC16.44■□□□□ 0.22
CDH1P12830 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms