Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.66■■□□□ 1.06
MS4A1P11836 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MS4A1P11836 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.65■■□□□ 1.06
MS4A1P11836 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.65■■□□□ 1.06
MS4A1P11836 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 AC013467.2-201ENST00000605472 835 ntBASIC21.65■■□□□ 1.06
MS4A1P11836 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
MS4A1P11836 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.65■■□□□ 1.06
MS4A1P11836 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
MS4A1P11836 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.65■■□□□ 1.06
MS4A1P11836 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MS4A1P11836 AL391256.1-201ENST00000443260 1855 ntBASIC21.64■■□□□ 1.06
MS4A1P11836 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
MS4A1P11836 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MS4A1P11836 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MS4A1P11836 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
MS4A1P11836 AL645728.1-201ENST00000366221 2101 ntBASIC21.64■■□□□ 1.06
MS4A1P11836 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MS4A1P11836 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
MS4A1P11836 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
MS4A1P11836 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
MS4A1P11836 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.64■■□□□ 1.05
MS4A1P11836 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.64■■□□□ 1.05
MS4A1P11836 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 AC021087.4-201ENST00000563761 564 ntBASIC21.64■■□□□ 1.05
MS4A1P11836 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
MS4A1P11836 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.64■■□□□ 1.05
MS4A1P11836 IFNL4P1-201ENST00000607083 540 ntBASIC21.64■■□□□ 1.05
MS4A1P11836 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MS4A1P11836 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
MS4A1P11836 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MS4A1P11836 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
MS4A1P11836 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.64■■□□□ 1.05
MS4A1P11836 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 TOP3BP1-201ENST00000420768 1380 ntBASIC21.63■■□□□ 1.05
MS4A1P11836 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC21.63■■□□□ 1.05
MS4A1P11836 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
MS4A1P11836 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MS4A1P11836 KRT18P56-201ENST00000507275 550 ntBASIC21.63■■□□□ 1.05
MS4A1P11836 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.63■■□□□ 1.05
MS4A1P11836 AC025062.2-201ENST00000605477 670 ntBASIC21.63■■□□□ 1.05
MS4A1P11836 AC107918.4-202ENST00000641623 219 ntBASIC21.63■■□□□ 1.05
MS4A1P11836 AL139011.1-202ENST00000642063 584 ntBASIC21.63■■□□□ 1.05
MS4A1P11836 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms