Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 AC046158.3-201ENST00000624947 2558 ntBASIC16.64■□□□□ 0.25
CAPN1P07384 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CAPN1P07384 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN1P07384 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 AC148477.5-201ENST00000625164 1645 ntBASIC16.63■□□□□ 0.25
CAPN1P07384 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN1P07384 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN1P07384 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN1P07384 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN1P07384 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CAPN1P07384 AC098831.1-202ENST00000438821 336 ntBASIC16.63■□□□□ 0.25
CAPN1P07384 BX005266.1-201ENST00000473402 457 ntBASIC16.63■□□□□ 0.25
CAPN1P07384 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.63■□□□□ 0.25
CAPN1P07384 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN1P07384 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CAPN1P07384 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN1P07384 AC092171.3-201ENST00000610122 2651 ntBASIC16.63■□□□□ 0.25
CAPN1P07384 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CAPN1P07384 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN1P07384 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN1P07384 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 SIGLEC16-201ENST00000599858 1437 ntBASIC16.62■□□□□ 0.25
CAPN1P07384 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CAPN1P07384 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN1P07384 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 PRYP5-201ENST00000451909 266 ntBASIC16.62■□□□□ 0.25
CAPN1P07384 AC092910.1-201ENST00000482027 1129 ntBASIC16.62■□□□□ 0.25
CAPN1P07384 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.62■□□□□ 0.25
CAPN1P07384 POLD2P1-201ENST00000511220 997 ntBASIC16.62■□□□□ 0.25
CAPN1P07384 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 GPALPP1-207ENST00000611650 899 ntBASIC16.62■□□□□ 0.25
CAPN1P07384 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 AL513477.1-201ENST00000602865 2407 ntBASIC16.62■□□□□ 0.25
CAPN1P07384 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CAPN1P07384 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN1P07384 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN1P07384 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN1P07384 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.62■□□□□ 0.25
CAPN1P07384 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CAPN1P07384 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 AC068418.2-201ENST00000577309 3703 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 AC004817.3-201ENST00000602957 2129 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CAPN1P07384 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPN1P07384 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms