Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 AL021920.2-201ENST00000624828 1351 ntBASIC14.97□□□□□ -0.01
APOC1P02654 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 FRMD8P1-201ENST00000440433 1524 ntBASIC14.97□□□□□ -0.01
APOC1P02654 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
APOC1P02654 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
APOC1P02654 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 AC079776.2-201ENST00000641154 1609 ntBASIC14.96□□□□□ -0.01
APOC1P02654 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.96□□□□□ -0.01
APOC1P02654 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.96□□□□□ -0.01
APOC1P02654 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.96□□□□□ -0.01
APOC1P02654 NUS1P2-201ENST00000417358 873 ntBASIC14.96□□□□□ -0.01
APOC1P02654 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 PRYP5-201ENST00000451909 266 ntBASIC14.96□□□□□ -0.01
APOC1P02654 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC1P02654 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.96□□□□□ -0.01
APOC1P02654 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC1P02654 AC092119.3-201ENST00000612618 583 ntBASIC14.96□□□□□ -0.01
APOC1P02654 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.96□□□□□ -0.01
APOC1P02654 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
APOC1P02654 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.96□□□□□ -0.01
APOC1P02654 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC1P02654 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.96□□□□□ -0.01
APOC1P02654 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOC1P02654 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.96□□□□□ -0.02
APOC1P02654 AC106886.4-201ENST00000623557 2502 ntBASIC14.96□□□□□ -0.02
APOC1P02654 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOC1P02654 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.96□□□□□ -0.02
APOC1P02654 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
APOC1P02654 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOC1P02654 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
APOC1P02654 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
APOC1P02654 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
APOC1P02654 AC097637.2-201ENST00000624096 1997 ntBASIC14.95□□□□□ -0.02
APOC1P02654 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.95□□□□□ -0.02
APOC1P02654 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.95□□□□□ -0.02
APOC1P02654 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
APOC1P02654 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.95□□□□□ -0.02
APOC1P02654 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.95□□□□□ -0.02
APOC1P02654 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 TSPY26P-202ENST00000565928 3884 ntBASIC14.95□□□□□ -0.02
APOC1P02654 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 AC005915.1-201ENST00000624912 2018 ntBASIC14.95□□□□□ -0.02
APOC1P02654 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC1P02654 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC1P02654 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC1P02654 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC1P02654 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms