Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-AP01891 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-AP01891 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-AP01891 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 TERF1P1-201ENST00000311003 1181 ntBASIC14.28□□□□□ -0.12
HLA-AP01891 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-AP01891 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AC113347.1-201ENST00000413321 391 ntBASIC14.28□□□□□ -0.12
HLA-AP01891 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-AP01891 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-AP01891 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AL512604.3-201ENST00000569583 964 ntBASIC14.28□□□□□ -0.12
HLA-AP01891 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-AP01891 AC024563.2-201ENST00000603282 481 ntBASIC14.28□□□□□ -0.12
HLA-AP01891 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-AP01891 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-AP01891 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-AP01891 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-AP01891 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-AP01891 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-AP01891 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HLA-AP01891 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HLA-AP01891 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HLA-AP01891 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.27□□□□□ -0.12
HLA-AP01891 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HLA-AP01891 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.27□□□□□ -0.12
HLA-AP01891 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HLA-AP01891 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HLA-AP01891 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-AP01891 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-AP01891 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-AP01891 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-AP01891 TSPY12P-201ENST00000421279 868 ntBASIC14.27□□□□□ -0.13
HLA-AP01891 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-AP01891 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-AP01891 IGHV3-52-201ENST00000519770 353 ntBASIC14.27□□□□□ -0.13
HLA-AP01891 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-AP01891 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-AP01891 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-AP01891 AC141257.4-201ENST00000634557 245 ntBASIC14.27□□□□□ -0.13
HLA-AP01891 AC136944.6-201ENST00000634818 245 ntBASIC14.27□□□□□ -0.13
HLA-AP01891 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-AP01891 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-AP01891 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-AP01891 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-AP01891 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-AP01891 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms