Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CSPG5O95196 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CSPG5O95196 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.09■□□□□ 0.49
CSPG5O95196 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSPG5O95196 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.08■□□□□ 0.49
CSPG5O95196 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSPG5O95196 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.08■□□□□ 0.49
CSPG5O95196 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSPG5O95196 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSPG5O95196 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSPG5O95196 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSPG5O95196 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CSPG5O95196 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.08■□□□□ 0.48
CSPG5O95196 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.08■□□□□ 0.48
CSPG5O95196 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.08■□□□□ 0.48
CSPG5O95196 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.08■□□□□ 0.48
CSPG5O95196 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CSPG5O95196 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.08■□□□□ 0.48
CSPG5O95196 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.08■□□□□ 0.48
CSPG5O95196 AC069120.2-201ENST00000524091 540 ntBASIC18.08■□□□□ 0.48
CSPG5O95196 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.08■□□□□ 0.48
CSPG5O95196 AC139713.2-201ENST00000641328 2723 ntBASIC18.08■□□□□ 0.48
CSPG5O95196 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CSPG5O95196 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSPG5O95196 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.08■□□□□ 0.48
CSPG5O95196 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CSPG5O95196 AC012569.1-201ENST00000591191 1524 ntBASIC18.08■□□□□ 0.48
CSPG5O95196 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CSPG5O95196 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CSPG5O95196 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.07■□□□□ 0.48
CSPG5O95196 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.07■□□□□ 0.48
CSPG5O95196 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.07■□□□□ 0.48
CSPG5O95196 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CSPG5O95196 AL161645.1-201ENST00000622716 1255 ntBASIC18.07■□□□□ 0.48
CSPG5O95196 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.07■□□□□ 0.48
CSPG5O95196 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.07■□□□□ 0.48
CSPG5O95196 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.07■□□□□ 0.48
CSPG5O95196 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CSPG5O95196 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CSPG5O95196 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSPG5O95196 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.06■□□□□ 0.48
CSPG5O95196 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.06■□□□□ 0.48
CSPG5O95196 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CSPG5O95196 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.06■□□□□ 0.48
CSPG5O95196 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.06■□□□□ 0.48
CSPG5O95196 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.06■□□□□ 0.48
CSPG5O95196 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.06■□□□□ 0.48
CSPG5O95196 AC097493.3-201ENST00000509725 367 ntBASIC18.06■□□□□ 0.48
CSPG5O95196 SERBP1P5-201ENST00000510079 1181 ntBASIC18.06■□□□□ 0.48
CSPG5O95196 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.06■□□□□ 0.48
CSPG5O95196 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.06■□□□□ 0.48
CSPG5O95196 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.06■□□□□ 0.48
CSPG5O95196 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.06■□□□□ 0.48
CSPG5O95196 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 AL009183.1-201ENST00000603760 355 ntBASIC18.06■□□□□ 0.48
CSPG5O95196 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms