Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 SNX18-202ENST00000343017 3140 ntBASIC15.36■□□□□ 0.05
CLPXO76031 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPXO76031 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.36■□□□□ 0.05
CLPXO76031 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.36■□□□□ 0.05
CLPXO76031 AC010203.1-204ENST00000548782 407 ntBASIC15.36■□□□□ 0.05
CLPXO76031 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.36■□□□□ 0.05
CLPXO76031 AL139327.4-201ENST00000612362 153 ntBASIC15.36■□□□□ 0.05
CLPXO76031 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLPXO76031 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CLPXO76031 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLPXO76031 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.35■□□□□ 0.05
CLPXO76031 HOXB1-202ENST00000577092 1414 ntBASIC15.35■□□□□ 0.05
CLPXO76031 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLPXO76031 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLPXO76031 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 ME2P1-201ENST00000426028 1970 ntBASIC15.35■□□□□ 0.05
CLPXO76031 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CLPXO76031 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CLPXO76031 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.35■□□□□ 0.05
CLPXO76031 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPXO76031 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPXO76031 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CLPXO76031 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPXO76031 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPXO76031 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 AC104581.4-201ENST00000623126 3052 ntBASIC15.34■□□□□ 0.05
CLPXO76031 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 HMGA1P5-201ENST00000412453 271 ntBASIC15.34■□□□□ 0.05
CLPXO76031 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.34■□□□□ 0.05
CLPXO76031 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 AL512604.3-201ENST00000569583 964 ntBASIC15.34■□□□□ 0.05
CLPXO76031 AC087388.1-201ENST00000571370 1112 ntBASIC15.34■□□□□ 0.05
CLPXO76031 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 FAM87A-204ENST00000613235 858 ntBASIC15.34■□□□□ 0.05
CLPXO76031 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLPXO76031 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms