Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC00895-201ENST00000629028 1637 ntBASIC7.39□□□□□ -1.23
USH2AO75445 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 FNTAP2-201ENST00000430308 634 ntBASIC7.39□□□□□ -1.23
USH2AO75445 PTPA-217ENST00000434095 870 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 RN7SL828P-201ENST00000607615 303 ntBASIC7.39□□□□□ -1.23
USH2AO75445 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 AC073130.3-201ENST00000624389 2278 ntBASIC7.39□□□□□ -1.23
USH2AO75445 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 GOLGA2P9-201ENST00000596977 1937 ntBASIC7.39□□□□□ -1.23
USH2AO75445 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 AC135776.1-201ENST00000319817 2481 ntBASIC7.39□□□□□ -1.23
USH2AO75445 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 RNU1-129P-201ENST00000384064 167 ntBASIC7.39□□□□□ -1.23
USH2AO75445 AC004898.1-201ENST00000451057 766 ntBASIC7.39□□□□□ -1.23
USH2AO75445 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 IGHV3-52-201ENST00000519770 353 ntBASIC7.39□□□□□ -1.23
USH2AO75445 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 DUX4L45-201ENST00000566406 1057 ntBASIC7.39□□□□□ -1.23
USH2AO75445 U1.21-201ENST00000580816 167 ntBASIC7.39□□□□□ -1.23
USH2AO75445 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 RN7SL818P-201ENST00000485099 259 ntBASIC7.39□□□□□ -1.23
USH2AO75445 AL512361.1-201ENST00000554200 418 ntBASIC7.39□□□□□ -1.23
USH2AO75445 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 RN7SL725P-201ENST00000606439 259 ntBASIC7.39□□□□□ -1.23
USH2AO75445 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
USH2AO75445 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
USH2AO75445 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC7.38□□□□□ -1.23
USH2AO75445 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC7.38□□□□□ -1.23
USH2AO75445 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC7.38□□□□□ -1.23
USH2AO75445 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC7.38□□□□□ -1.23
USH2AO75445 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
USH2AO75445 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC7.38□□□□□ -1.23
USH2AO75445 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
USH2AO75445 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
USH2AO75445 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC7.38□□□□□ -1.23
USH2AO75445 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 AC141586.1-203ENST00000567242 366 ntBASIC7.38□□□□□ -1.23
USH2AO75445 EIF5AP2-201ENST00000585668 1047 ntBASIC7.38□□□□□ -1.23
USH2AO75445 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC7.38□□□□□ -1.23
USH2AO75445 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms