Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB2O43679 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 AL512652.2-201ENST00000625156 1716 ntBASIC16.82■□□□□ 0.28
LDB2O43679 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.82■□□□□ 0.28
LDB2O43679 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 KRT8P39-201ENST00000396270 1433 ntBASIC16.82■□□□□ 0.28
LDB2O43679 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.82■□□□□ 0.28
LDB2O43679 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.82■□□□□ 0.28
LDB2O43679 AC087641.1-201ENST00000557561 1021 ntBASIC16.82■□□□□ 0.28
LDB2O43679 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.82■□□□□ 0.28
LDB2O43679 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.82■□□□□ 0.28
LDB2O43679 Z83851.2-201ENST00000609564 659 ntBASIC16.82■□□□□ 0.28
LDB2O43679 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.82■□□□□ 0.28
LDB2O43679 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDB2O43679 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.82■□□□□ 0.28
LDB2O43679 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.81■□□□□ 0.28
LDB2O43679 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.81■□□□□ 0.28
LDB2O43679 HCG4-201ENST00000418983 998 ntBASIC16.81■□□□□ 0.28
LDB2O43679 HCG4B-203ENST00000450128 991 ntBASIC16.81■□□□□ 0.28
LDB2O43679 CXCL1P1-201ENST00000502804 216 ntBASIC16.81■□□□□ 0.28
LDB2O43679 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 AC145285.3-201ENST00000564603 959 ntBASIC16.81■□□□□ 0.28
LDB2O43679 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.81■□□□□ 0.28
LDB2O43679 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.81■□□□□ 0.28
LDB2O43679 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.81■□□□□ 0.28
LDB2O43679 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.81■□□□□ 0.28
LDB2O43679 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 PCDHB19P-201ENST00000570871 2371 ntBASIC16.81■□□□□ 0.28
LDB2O43679 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDB2O43679 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.81■□□□□ 0.28
LDB2O43679 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LDB2O43679 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.8■□□□□ 0.28
LDB2O43679 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.8■□□□□ 0.28
LDB2O43679 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 AC034105.1-201ENST00000563488 319 ntBASIC16.8■□□□□ 0.28
LDB2O43679 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.8■□□□□ 0.28
LDB2O43679 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.8■□□□□ 0.28
LDB2O43679 AC120114.3-201ENST00000611923 658 ntBASIC16.8■□□□□ 0.28
LDB2O43679 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.8■□□□□ 0.28
LDB2O43679 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.8■□□□□ 0.28
LDB2O43679 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDB2O43679 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms