Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNAI2O43623 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNAI2O43623 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.68□□□□□ -0.38
SNAI2O43623 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.68□□□□□ -0.38
SNAI2O43623 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.68□□□□□ -0.38
SNAI2O43623 IGHGP-201ENST00000390555 1178 ntBASIC12.68□□□□□ -0.38
SNAI2O43623 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SNAI2O43623 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.68□□□□□ -0.38
SNAI2O43623 IGHV3-52-201ENST00000519770 353 ntBASIC12.68□□□□□ -0.38
SNAI2O43623 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SNAI2O43623 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 AC141257.4-201ENST00000634557 245 ntBASIC12.68□□□□□ -0.38
SNAI2O43623 AC136944.6-201ENST00000634818 245 ntBASIC12.68□□□□□ -0.38
SNAI2O43623 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SNAI2O43623 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SNAI2O43623 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNAI2O43623 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.68□□□□□ -0.38
SNAI2O43623 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.68□□□□□ -0.38
SNAI2O43623 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 AC092068.3-201ENST00000587894 2016 ntBASIC12.67□□□□□ -0.38
SNAI2O43623 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SNAI2O43623 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.67□□□□□ -0.38
SNAI2O43623 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.67□□□□□ -0.38
SNAI2O43623 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.67□□□□□ -0.38
SNAI2O43623 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.67□□□□□ -0.38
SNAI2O43623 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.67□□□□□ -0.38
SNAI2O43623 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.67□□□□□ -0.38
SNAI2O43623 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNAI2O43623 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms