Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TSPY26P-201ENST00000476365 1326 ntBASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 GRAMD4P2-201ENST00000423297 1097 ntBASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 RCC2P6-201ENST00000526625 1557 ntBASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 AC092123.2-201ENST00000611189 5421 ntBASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CHKB-CPT1BH3BT56 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms