Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SPDYE21P-201ENST00000413323 827 ntBASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AP000867.4-201ENST00000641616 219 ntBASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AL365203.3-201ENST00000609742 2057 ntBASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 HYMAI-201ENST00000635591 3347 ntBASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 LINC00982-205ENST00000420957 435 ntBASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 Z69720.1-201ENST00000601483 472 ntBASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 KRT8P49-201ENST00000604166 1432 ntBASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM49D1C9J1S8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 NSUN5P1-202ENST00000421140 1535 ntBASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 NSUN5P2-203ENST00000457352 1529 ntBASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 AC105917.1-201ENST00000506637 2539 ntBASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms