Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 SLC25A1P3-201ENST00000395415 828 ntBASIC15.81■□□□□ 0.12
CLCA1A8K7I4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 SART3-203ENST00000546611 1184 ntBASIC15.81■□□□□ 0.12
CLCA1A8K7I4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 AC079328.2-201ENST00000561241 3354 ntBASIC15.81■□□□□ 0.12
CLCA1A8K7I4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 AC148477.8-201ENST00000624298 468 ntBASIC15.81■□□□□ 0.12
CLCA1A8K7I4 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
CLCA1A8K7I4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCA1A8K7I4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AL031284.1-201ENST00000419297 478 ntBASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AC103564.2-201ENST00000432853 1299 ntBASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AC018712.1-201ENST00000455767 687 ntBASIC15.8■□□□□ 0.12
CLCA1A8K7I4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 AL139288.1-201ENST00000623748 933 ntBASIC15.8■□□□□ 0.12
CLCA1A8K7I4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCA1A8K7I4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms