Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 AC103702.1-201ENST00000548801 2630 ntBASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 RNA5SP419-201ENST00000515908 135 ntBASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 IGHV3-65-201ENST00000523210 341 ntBASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 GGTLC5P-201ENST00000617623 998 ntBASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC162PA2VCL2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 HLA-A-202ENST00000376806 1854 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TPM4P1-201ENST00000436100 807 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC009078.2-202ENST00000463353 338 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC092910.1-201ENST00000482027 1129 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 SLC25A6P4-201ENST00000586535 553 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC117500.6-201ENST00000624871 588 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC005593.1-201ENST00000624894 515 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 AC006277.1-201ENST00000624348 1610 ntBASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC162PA2VCL2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC162PA2VCL2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms