Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 NUS1P2-201ENST00000417358 873 ntBASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV9S1A1TA0A576 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 GGT3P-204ENST00000453783 1664 ntBASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 SNX33P1-201ENST00000592116 1762 ntBASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 PRYP5-201ENST00000451909 266 ntBASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 AL671710.1-201ENST00000610245 2349 ntBASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV9S1A1TA0A576 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 AP005117.1-201ENST00000584346 1413 ntBASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 BX005266.1-201ENST00000473402 457 ntBASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 AC087388.1-201ENST00000571370 1112 ntBASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 AP001269.4-201ENST00000609611 512 ntBASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV9S1A1TA0A576 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 AC105917.1-201ENST00000506637 2539 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms