Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 AC002310.6-201ENST00000624451 1377 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 AKR1C7P-201ENST00000305623 895 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 TSPY19P-201ENST00000418461 509 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 TSPY18P-201ENST00000441642 509 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 HCG4P8-203ENST00000443049 980 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 MIR4492-201ENST00000581627 80 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 AC008608.2-201ENST00000606089 416 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 REXO1L3P-201ENST00000622202 1288 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 GGT3P-204ENST00000453783 1664 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 PAUPAR-201ENST00000630360 2965 ntBASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV7S3A2A0A539 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 AC006504.4-201ENST00000592118 1568 ntBASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 AC087163.2-201ENST00000457299 853 ntBASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV7S3A2A0A539 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV7S3A2A0A539 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms