Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 AP005901.3-202ENST00000581653 237 ntBASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC092053.1-201ENST00000605787 1936 ntBASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC016734.2-201ENST00000624325 1377 ntBASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 KRT18P1-202ENST00000452408 1331 ntBASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF103-CHMP3A0A140T963 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AL353593.2-201ENST00000602529 1483 ntBASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 TSSC2-201ENST00000450217 709 ntBASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC087388.1-201ENST00000571370 1112 ntBASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC011467.2-201ENST00000598425 242 ntBASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms