Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 KRT18P56-201ENST00000507275 550 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 AL805961.1-202ENST00000641562 540 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 AL139011.1-202ENST00000642063 584 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CLIC4Q9Y696 PCDHA1-201ENST00000378133 2726 ntBASIC19.24■□□□□ 0.67
CLIC4Q9Y696 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 AL512652.2-201ENST00000625156 1716 ntBASIC19.23■□□□□ 0.67
CLIC4Q9Y696 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 AC073621.1-201ENST00000392730 636 ntBASIC19.23■□□□□ 0.67
CLIC4Q9Y696 LAGE3P1-201ENST00000425356 484 ntBASIC19.23■□□□□ 0.67
CLIC4Q9Y696 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TP73-AS1-207ENST00000624167 988 ntBASIC19.23■□□□□ 0.67
CLIC4Q9Y696 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 AF228730.7-201ENST00000641842 219 ntBASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIC4Q9Y696 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 SLC22A20-204ENST00000530038 1673 ntBASIC19.22■□□□□ 0.67
CLIC4Q9Y696 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 KRT18P27-201ENST00000427733 1299 ntBASIC19.22■□□□□ 0.67
CLIC4Q9Y696 PMS2P1-201ENST00000431037 1228 ntBASIC19.22■□□□□ 0.67
CLIC4Q9Y696 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 LINC01711-201ENST00000598340 967 ntBASIC19.22■□□□□ 0.67
CLIC4Q9Y696 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms