Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 BCAR1-209ENST00000546196 1340 ntBASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 ACTG1P4-201ENST00000425123 1122 ntBASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
PCDHGA3Q9Y5H0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA3Q9Y5H0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC092850.2-201ENST00000623821 2697 ntBASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC103702.1-201ENST00000548801 2630 ntBASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC074386.1-202ENST00000463561 864 ntBASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 CYMP-203ENST00000474680 1263 ntBASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AP002472.1-201ENST00000577490 586 ntBASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 AC023141.13-201ENST00000604991 943 ntBASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA3Q9Y5H0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms