Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 AC019129.2-201ENST00000609837 1235 ntBASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 BCAR1-209ENST00000546196 1340 ntBASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 AL596257.1-201ENST00000641463 2694 ntBASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA8Q9Y5G5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 AC027612.4-201ENST00000605371 583 ntBASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 AC106028.4-201ENST00000614509 607 ntBASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 AC007064.4-201ENST00000637740 555 ntBASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA8Q9Y5G5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 AC068418.2-201ENST00000577309 3703 ntBASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 TSEN15P1-201ENST00000423257 515 ntBASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 AC074386.1-202ENST00000463561 864 ntBASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 STK19B-204ENST00000512515 211 ntBASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 STK25P1-201ENST00000585406 838 ntBASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA8Q9Y5G5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms