Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 AL355877.3-201ENST00000622820 899 ntBASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 ACTG1P4-201ENST00000425123 1122 ntBASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 SCARNA2-201ENST00000458748 420 ntBASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 FER1L4-210ENST00000615531 5998 ntBASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB3Q9Y5G1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 GPR89P-201ENST00000407924 1495 ntBASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 KRT18P67-201ENST00000432816 1264 ntBASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 AF186996.4-201ENST00000467186 377 ntBASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 AC008608.2-201ENST00000606089 416 ntBASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 AL773604.1-201ENST00000617417 272 ntBASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms