Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 AC126177.1-201ENST00000547829 2218 ntBASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 UBE2SP1-201ENST00000450587 669 ntBASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.84□□□□□ -0.19
RCL1Q9Y2P8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RCL1Q9Y2P8 AL365209.1-201ENST00000624418 6473 ntBASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 IGHGP-201ENST00000390555 1178 ntBASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 GCSHP2-201ENST00000560971 527 ntBASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 AC111152.3-201ENST00000569699 673 ntBASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 ITM2C-210ENST00000620962 501 ntBASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms