Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 AC097376.2-205ENST00000610159 5334 ntBASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 AC092053.1-201ENST00000605787 1936 ntBASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 KRT8P41-201ENST00000533985 1514 ntBASIC14.31□□□□□ -0.12
UBQLN2Q9UHD9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 AC130371.2-201ENST00000619443 611 ntBASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 AC009102.3-201ENST00000623118 1491 ntBASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 AC023908.3-201ENST00000564211 3047 ntBASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN2Q9UHD9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms