Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PKD1P5-201ENST00000532415 10291 ntBASIC17.1■□□□□ 0.33
HACD3Q9P035 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.1■□□□□ 0.33
HACD3Q9P035 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
HACD3Q9P035 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HACD3Q9P035 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.09■□□□□ 0.33
HACD3Q9P035 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.09■□□□□ 0.33
HACD3Q9P035 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
HACD3Q9P035 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 AC087163.2-201ENST00000457299 853 ntBASIC17.09■□□□□ 0.33
HACD3Q9P035 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.09■□□□□ 0.33
HACD3Q9P035 IGHV3-65-201ENST00000523210 341 ntBASIC17.09■□□□□ 0.33
HACD3Q9P035 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.09■□□□□ 0.33
HACD3Q9P035 DUX4L17-201ENST00000557360 1267 ntBASIC17.09■□□□□ 0.33
HACD3Q9P035 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 MIR7706-201ENST00000613747 67 ntBASIC17.09■□□□□ 0.33
HACD3Q9P035 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 AP002414.3-201ENST00000589352 1468 ntBASIC17.09■□□□□ 0.33
HACD3Q9P035 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HACD3Q9P035 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.09■□□□□ 0.33
HACD3Q9P035 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
HACD3Q9P035 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HACD3Q9P035 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HACD3Q9P035 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.33
HACD3Q9P035 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.08■□□□□ 0.33
HACD3Q9P035 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HACD3Q9P035 AC092068.3-201ENST00000587894 2016 ntBASIC17.08■□□□□ 0.33
HACD3Q9P035 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HACD3Q9P035 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.08■□□□□ 0.32
HACD3Q9P035 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.08■□□□□ 0.32
HACD3Q9P035 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.08■□□□□ 0.32
HACD3Q9P035 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HACD3Q9P035 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.08■□□□□ 0.32
HACD3Q9P035 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 AC009078.2-202ENST00000463353 338 ntBASIC17.08■□□□□ 0.32
HACD3Q9P035 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.08■□□□□ 0.32
HACD3Q9P035 RNA5SP419-201ENST00000515908 135 ntBASIC17.08■□□□□ 0.32
HACD3Q9P035 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.08■□□□□ 0.32
HACD3Q9P035 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.08■□□□□ 0.32
HACD3Q9P035 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.08■□□□□ 0.32
HACD3Q9P035 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HACD3Q9P035 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HACD3Q9P035 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
HACD3Q9P035 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HACD3Q9P035 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HACD3Q9P035 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 KRT8P49-201ENST00000604166 1432 ntBASIC17.07■□□□□ 0.32
HACD3Q9P035 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms