Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 HLA-H-201ENST00000383620 1096 ntBASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 SPTSSB-204ENST00000617024 1292 ntBASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 AL035456.1-201ENST00000456064 1369 ntBASIC19.17■□□□□ 0.66
HOXC10Q9NYD6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 FOXO1B-201ENST00000504678 1527 ntBASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC10Q9NYD6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 FAM220BP-201ENST00000377689 816 ntBASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 TSSK5P-201ENST00000423978 907 ntBASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 AC005034.1-201ENST00000426657 489 ntBASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 AC244107.1-201ENST00000442033 332 ntBASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 HLA-V-204ENST00000476601 1289 ntBASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 AC098859.1-201ENST00000502915 1238 ntBASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC10Q9NYD6 AC073439.1-201ENST00000624121 1774 ntBASIC19.14■□□□□ 0.66
HOXC10Q9NYD6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 MRPS18AP1-201ENST00000414458 589 ntBASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.14■□□□□ 0.65
HOXC10Q9NYD6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms